PoplarV1, Main, Exploration, bibRecord, 000937

Genome-Wide Identification and Transcriptional Expression of the PAL Gene Family in Common Walnut (Juglans Regia L.).

Identifieur interne : 000937 ( Main/Exploration ); précédent : 000936; suivant : 000938

Genome-Wide Identification and Transcriptional Expression of the PAL Gene Family in Common Walnut (Juglans Regia L.).

Auteurs : Feng Yan [République populaire de Chine] ; Huaizhu Li [République populaire de Chine] ; Peng Zhao [République populaire de Chine]

Source :

Genes [ 2073-4425 ] ; 2019.

RBID : pubmed:30650597

Descripteurs français

English descriptors

KwdEn :
- Flowers (genetics), Flowers (metabolism), Gene Expression Regulation, Plant (MeSH), Genome, Plant (MeSH), Juglans (classification), Juglans (genetics), MicroRNAs (genetics), MicroRNAs (metabolism), Multigene Family (MeSH), Phenylalanine Ammonia-Lyase (genetics), Phenylalanine Ammonia-Lyase (metabolism), Phylogeny (MeSH), Plant Proteins (genetics), Plant Proteins (metabolism).
MESH :
- chemical , genetics : MicroRNAs, Phenylalanine Ammonia-Lyase, Plant Proteins.
- classification : Juglans.
- genetics : Flowers, Juglans.
- metabolism : Flowers, MicroRNAs, Phenylalanine Ammonia-Lyase, Plant Proteins.
- Gene Expression Regulation, Plant, Genome, Plant, Multigene Family, Phylogeny.

Abstract

Juglans regia L. is an economically important crop cultivated worldwide for its high quality and quantity of wood and nuts. Phenylalanine ammonia-lyase (PAL) is the first enzyme in the phenylpropanoid pathway that plays a critical role in plant growth, development, and adaptation, but there have been few reports of the PAL gene family in common walnut. Here, we report a genome-wide study of J. regiaPAL genes and analyze their phylogeny, duplication, microRNA, and transcriptional expression. A total of 12 PAL genes were identified in the common walnut and clustered into two subfamilies based on phylogenetic analysis. These common walnut PALs are distributed on eight different pseudo-chromosomes. Seven of the 12 PALs (JrPAL2-3, JrPAL4-2, JrPAL2-1, JrPAL4-1, JrPAL8, JrPAL9, and JrPAL6) were specific found in J. regia, and JrPAL3, JrPAL5, JrPAL1-2, JrPAL7, and JrPAL2-2 were found to be closely associated with the woody plant Populus trichocarpa. Additionally, the expression patterns of JrPAL3, JrPAL7, JrPAL9, and JrPAL2-1 showed that they had high expression in female and male flowers. The miRNA ath-miR830-5p regulates two genes, JrPAL5 and JrPAL1, such that they have low expression in the male and female flowers of the common walnut. Our research provides useful information for further research into the function of PAL genes in common walnut and Juglans.

DOI: 10.3390/genes10010046
PubMed: 30650597
PubMed Central: PMC6357058

Affiliations:

République populaire de Chine

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Le document en format XML

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<term>Juglans (classification)</term>
<term>Juglans (genetics)</term>
<term>MicroRNAs (genetics)</term>
<term>MicroRNAs (metabolism)</term>
<term>Multigene Family (MeSH)</term>
<term>Phenylalanine Ammonia-Lyase (genetics)</term>
<term>Phenylalanine Ammonia-Lyase (metabolism)</term>
<term>Phylogeny (MeSH)</term>
<term>Plant Proteins (genetics)</term>
<term>Plant Proteins (metabolism)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Famille multigénique (MeSH)</term>
<term>Fleurs (génétique)</term>
<term>Fleurs (métabolisme)</term>
<term>Génome végétal (MeSH)</term>
<term>Juglans (classification)</term>
<term>Juglans (génétique)</term>
<term>Phenylalanine ammonia-lyase (génétique)</term>
<term>Phenylalanine ammonia-lyase (métabolisme)</term>
<term>Phylogenèse (MeSH)</term>
<term>Protéines végétales (génétique)</term>
<term>Protéines végétales (métabolisme)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>microARN (génétique)</term>
<term>microARN (métabolisme)</term>
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<term>Phenylalanine Ammonia-Lyase</term>
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<term>Juglans</term>
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<term>Juglans</term>
<term>Phenylalanine ammonia-lyase</term>
<term>Protéines végétales</term>
<term>microARN</term>
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<front><div type="abstract" xml:lang="en"><i>Juglans regia</i>
 L. is an economically important crop cultivated worldwide for its high quality and quantity of wood and nuts. Phenylalanine ammonia-lyase (PAL) is the first enzyme in the phenylpropanoid pathway that plays a critical role in plant growth, development, and adaptation, but there have been few reports of the <i>PAL</i>
 gene family in common walnut. Here, we report a genome-wide study of <i>J. regia</i>
<i>PAL</i>
 genes and analyze their phylogeny, duplication, microRNA, and transcriptional expression. A total of 12 <i>PAL</i>
 genes were identified in the common walnut and clustered into two subfamilies based on phylogenetic analysis. These common walnut <i>PAL</i>
s are distributed on eight different pseudo-chromosomes. Seven of the 12 <i>PAL</i>
s (<i>JrPAL2-3</i>
, <i>JrPAL4-2</i>
, <i>JrPAL2-1</i>
, <i>JrPAL4-1</i>
, <i>JrPAL8</i>
, <i>JrPAL9</i>
, and <i>JrPAL6</i>
) were specific found in <i>J. regia</i>
, and <i>JrPAL3</i>
, <i>JrPAL5</i>
, <i>JrPAL1-2</i>
, <i>JrPAL7</i>
, and <i>JrPAL2-2</i>
 were found to be closely associated with the woody plant <i>Populus trichocarpa</i>
. Additionally, the expression patterns of <i>JrPAL3</i>
, <i>JrPAL7</i>
, <i>JrPAL9</i>
, and <i>JrPAL2-1</i>
 showed that they had high expression in female and male flowers. The miRNA ath-miR830-5p regulates two genes, <i>JrPAL5</i>
 and <i>JrPAL1</i>
, such that they have low expression in the male and female flowers of the common walnut. Our research provides useful information for further research into the function of <i>PAL</i>
 genes in common walnut and <i>Juglans</i>
.</div>
</front>
</TEI>
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<DateCompleted><Year>2019</Year>
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<ArticleTitle>Genome-Wide Identification and Transcriptional Expression of the <i>PAL</i>
 Gene Family in Common Walnut (<i>Juglans Regia</i>
 L.).</ArticleTitle>
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<Abstract><AbstractText><i>Juglans regia</i>
 L. is an economically important crop cultivated worldwide for its high quality and quantity of wood and nuts. Phenylalanine ammonia-lyase (PAL) is the first enzyme in the phenylpropanoid pathway that plays a critical role in plant growth, development, and adaptation, but there have been few reports of the <i>PAL</i>
 gene family in common walnut. Here, we report a genome-wide study of <i>J. regia</i>
<i>PAL</i>
 genes and analyze their phylogeny, duplication, microRNA, and transcriptional expression. A total of 12 <i>PAL</i>
 genes were identified in the common walnut and clustered into two subfamilies based on phylogenetic analysis. These common walnut <i>PAL</i>
s are distributed on eight different pseudo-chromosomes. Seven of the 12 <i>PAL</i>
s (<i>JrPAL2-3</i>
, <i>JrPAL4-2</i>
, <i>JrPAL2-1</i>
, <i>JrPAL4-1</i>
, <i>JrPAL8</i>
, <i>JrPAL9</i>
, and <i>JrPAL6</i>
) were specific found in <i>J. regia</i>
, and <i>JrPAL3</i>
, <i>JrPAL5</i>
, <i>JrPAL1-2</i>
, <i>JrPAL7</i>
, and <i>JrPAL2-2</i>
 were found to be closely associated with the woody plant <i>Populus trichocarpa</i>
. Additionally, the expression patterns of <i>JrPAL3</i>
, <i>JrPAL7</i>
, <i>JrPAL9</i>
, and <i>JrPAL2-1</i>
 showed that they had high expression in female and male flowers. The miRNA ath-miR830-5p regulates two genes, <i>JrPAL5</i>
 and <i>JrPAL1</i>
, such that they have low expression in the male and female flowers of the common walnut. Our research provides useful information for further research into the function of <i>PAL</i>
 genes in common walnut and <i>Juglans</i>
.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Yan</LastName>
<ForeName>Feng</ForeName>
<Initials>F</Initials>
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<AffiliationInfo><Affiliation>Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi'an, Shaanxi 710069, China. fengyan115@163.com.</Affiliation>
</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Li</LastName>
<ForeName>Huaizhu</ForeName>
<Initials>H</Initials>
<AffiliationInfo><Affiliation>School of Chemistry and Chemical Engineering, Xianyang Normal University, Xianyang 712000, China. lihuaizhu121@126.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zhao</LastName>
<ForeName>Peng</ForeName>
<Initials>P</Initials>
<Identifier Source="ORCID">0000-0003-3033-6982</Identifier>
<AffiliationInfo><Affiliation>Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi'an, Shaanxi 710069, China. pengzhao@nwu.edu.cn.</Affiliation>
</AffiliationInfo>
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<MeshHeading><DescriptorName UI="D010650" MajorTopicYN="N">Phenylalanine Ammonia-Lyase</DescriptorName>
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<MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName>
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<ReferenceList><Reference><Citation>Nucleic Acids Res. 2012 Jan;40(Database issue):D302-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22053084</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Integr Med. 2016 Sep;14(5):359-73</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27641607</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Bioinformatics. 2004 Aug 19;5:113</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15318951</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2016 Jan 4;44(D1):D279-85</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26673716</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Biochem Cell Biol. 2007 Jun;85(3):273-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17612622</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2008 Aug;20(8):2238-51</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18682547</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 1995 Jul;7(7):1085-1097</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12242399</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2007 Sep 27;449(7161):463-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17721507</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2011 Mar;62(5):1611-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21357774</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Molecules. 2012 Jun 26;17(7):7810-23</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22735783</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Nutr Biochem. 2015 Jul;26(7):776-83</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25882694</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2012 Apr;40(7):e49</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22217600</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Biotechnol. 2011 May 15;29(7):644-52</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21572440</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Chem Ecol. 2013 Feb;39(2):204-12</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23385369</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2015 Apr 15;31(8):1296-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25504850</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Immunol Rev. 2004 Apr;198:267-84</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15199968</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Plant Sci. 2005 Sep;10(9):444-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16054418</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Biol. 2014;15(12):550</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25516281</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 2012 Oct;236(4):1093-105</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22572777</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Protoc. 2012 Mar 01;7(3):562-78</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22383036</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Chin J Nat Med. 2016 Nov;14(11):801-812</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27914524</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2004 Nov;16(11):3098-109</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15472080</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2015 Jul 1;43(W1):W39-49</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25953851</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Biol Chem. 1961 Oct;236:2692-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14458851</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 1989 Jun;8(6):1641-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2767049</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Phytochemistry. 2004 Jun;65(11):1557-64</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15276452</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2003 Nov;133(3):1051-71</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14612585</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2013 Jul;162(3):1225-45</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23709668</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Mol Biol. 1995 Jan;27(2):327-38</Citation>
<ArticleIdList><ArticleId IdType="pubmed">7888622</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 2012 Jul;236(1):313-26</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22349733</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2014 Nov 05;9(11):e111988</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25372567</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2011 Jul;39(Web Server issue):W155-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21622958</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Plant Physiol. 2014 Jul 1;171(11):895-902</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24913046</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 2003 Nov;13(11):2498-504</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14597658</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Biol. 2010;11(10):R106</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20979621</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 2013 Jul;238(1):35-49</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23546528</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2010 Aug;153(4):1526-38</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20566705</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2012 Mar;193(4):1022-38</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22150097</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Genomics. 2013;2013:678969</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23671845</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2015 Sep 02;10(8):e0135980</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26332919</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Physiol. 2010 Jan;51(1):144-63</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19996151</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genes (Basel). 2017 Aug 25;8(9):</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28841197</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Plant Biol. 2009;60:433-53</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19575588</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2015 Apr 20;10(4):e0123281</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25894196</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2005 Sep 15;21(18):3674-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16081474</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Bioinformatics. 2015 Oct 28;16:347</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26511205</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2010 Jan 1;26(1):136-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19855105</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2016 Sep;87(5):507-32</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27145194</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Comp Funct Genomics. 2011;2011:409386</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21527980</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Plant. 2010 Jan;3(1):2-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20035037</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Evol Biol. 2012 Apr 12;12:51</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22497662</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2014 Jun;65(9):2295-306</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24642849</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Agric Food Chem. 2018 Mar 21;66(11):2742-2748</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29494766</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2010 Jun 28;5(6):e11335</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20596258</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Phytochemistry. 2015 Sep;117:90-97</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26070140</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Rep. 2013 Jul;40(7):4301-10</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23644983</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioresour Technol. 2010 Dec;101(24):9715-22</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20708926</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2016 Jul;33(7):1870-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27004904</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2006;172(1):47-62</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16945088</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genes (Basel). 2018 Apr 23;9(4):</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29690608</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2012 Jun 11;13 Suppl 3:S1</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22759610</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Tree Physiol. 2002 Apr;22(5):291-300</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11960753</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Plant Biol. 2011 Feb 25;11:40</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21349199</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
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Genome-Wide Identification and Transcriptional Expression of the PAL Gene Family in Common Walnut (Juglans Regia L.).

Genome-Wide Identification and Transcriptional Expression of the PAL Gene Family in Common Walnut (Juglans Regia L.).

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